auto start container in deploy.sh

deploy.sh

@@ -2,9 +2,9 @@
 # Deploy/start the API. Choose runner with the first argument.
 #
 # Usage:
-#   ./deploy.sh             # auto: conda if active, otherwise uv
+#   ./deploy.sh             # db + minio containers, then host API (auto runner)
-#   ./deploy.sh conda       # host API via conda
+#   ./deploy.sh conda       # db + minio containers, then host API via conda
-#   ./deploy.sh uv          # host API via uv
+#   ./deploy.sh uv          # db + minio containers, then host API via uv
 #   ./deploy.sh docker      # Docker stack: api + db + minio
 #   ./deploy.sh --help
 
@@ -17,14 +17,52 @@ usage() {
 Deploy/start the API. Choose runner with the first argument.
 
 Usage:
-  ./deploy.sh             # auto: conda if active, otherwise uv
+  ./deploy.sh             # db + minio containers, then host API (auto runner)
-  ./deploy.sh conda       # host API via conda
+  ./deploy.sh conda       # db + minio containers, then host API via conda
-  ./deploy.sh uv          # host API via uv
+  ./deploy.sh uv          # db + minio containers, then host API via uv
   ./deploy.sh docker      # Docker stack: api + db + minio
   ./deploy.sh --help
 EOF
 }
 
+ensure_host_dependency_containers() {
+  if [[ "${START_DEPENDENCY_CONTAINERS:-1}" == "0" ]]; then
+    echo "START_DEPENDENCY_CONTAINERS=0: not starting db/minio containers"
+    return
+  fi
+
+  local compose_file="${COMPOSE_FILE:-docker-compose.yml}"
+  echo "Starting dependency containers: db + minio (${compose_file})..."
+  docker compose -f "$ROOT/${compose_file}" up -d db minio
+
+  local db_container
+  db_container="$(docker compose -f "$ROOT/${compose_file}" ps -q db)"
+  if [[ -z "$db_container" ]]; then
+    echo "Failed to find db container after docker compose up." >&2
+    exit 1
+  fi
+
+  echo "Waiting for PostgreSQL container to become healthy..."
+  local status
+  for _ in {1..60}; do
+    status="$(docker inspect -f '{{if .State.Health}}{{.State.Health.Status}}{{else}}{{.State.Status}}{{end}}' "$db_container")"
+    if [[ "$status" == "healthy" || "$status" == "running" ]]; then
+      echo "PostgreSQL container is ${status}."
+      return
+    fi
+    sleep 1
+  done
+
+  echo "PostgreSQL container did not become ready in time." >&2
+  docker compose -f "$ROOT/${compose_file}" ps db >&2
+  exit 1
+}
+
+start_host_api() {
+  ensure_host_dependency_containers
+  exec "$@"
+}
+
 runner="${1:-auto}"
 case "$runner" in
   -h|--help|help)
@@ -33,11 +71,12 @@ case "$runner" in
     ;;
   auto)
     shift || true
-    exec "$ROOT/start_api.sh" "$@"
+    start_host_api "$ROOT/start_api.sh" "$@"
     ;;
   conda|uv|system|python)
     shift || true
-    API_RUNNER="$runner" exec "$ROOT/start_api.sh" "$@"
+    export API_RUNNER="$runner"
+    start_host_api "$ROOT/start_api.sh" "$@"
     ;;
   docker)
     shift || true